Note: Put your code in functions.php of your current theme.
function custom_manipulate_container_columns_callback($columns){
// Remove columns
unset($columns['flight']);
unset($columns['shipments']);
unset($columns['agent']);
unset($columns['delivery_agent']);
unset($columns['status']);
unset($columns['scprint']);
unset($columns['scmanifest']);
// Rename columns
$columns['flight'] = 'Flight Label';
$columns['shipments'] = 'Shipment Label';
$columns['agent'] = 'Agent Column Label';
$columns['delivery_agent'] = 'Delivery Agent Label';
$columns['status'] = 'Status label';
$columns['scprint'] = 'Print Label';
$columns['scmanifest'] = 'Manifet Label';
return $columns;
}
add_filter('wpcsc_table_key_label', 'custom_manipulate_container_columns_callback');